Quick start tutorial:
Common errors, using containers:
API:
Nanostring WTA Tutorial (pymc3):
cell2location
cell2location.cluster_averages.cluster_averages
cell2location.cluster_averages.markers_by_hierarhy
cell2location.cluster_averages.select_features
cell2location.distributions
cell2location.models.base._pyro_mixin
cell2location.models.base.base_model
cell2location.models.downstream.ArchetypalAnalysis
cell2location.models.downstream.CoLocatedGroupsSklearnNMF
cell2location.plt
cell2location.plt.mapping_video
cell2location.plt.plot_expected_vs_obs
cell2location.plt.plot_factor_spatial
cell2location.plt.plot_heatmap
cell2location.plt.RotateCrop
cell2location.utils.filtering